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Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
---|---|---|---|---|
6 | 3 | 4 | 0.987 | stmt_list[3] |
Clone Abstraction | Parameter Bindings |
Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
---|---|---|---|
1 | 6 | 164 | Bio/SeqIO/_convert.py |
2 | 6 | 199 | Bio/SeqIO/_convert.py |
3 | 6 | 215 | Bio/SeqIO/_convert.py |
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mapping = "".join([chr(0) for ascii in range(0,59)]+[chr(33+int(round(phred_quality_from_solexa(q)))) for q in range( -5,62+1)]+[chr(0) for ascii in range(127,256)]) assert len(mapping)==256 return _fastq_generic(in_handle,out_handle,mapping) |
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mapping = "".join([chr(0) for ascii in range(0,59)]+[chr(64+int(round(phred_quality_from_solexa(q)))) for q in range( -5,62+1)]+[chr(0) for ascii in range(127,256)]) assert len(mapping)==256 return _fastq_generic(in_handle,out_handle,mapping) |
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mapping = "".join([chr(0) for ascii in range(0,64)]+[chr(64+int(round(solexa_quality_from_phred(q)))) for q in range(0,62+1)]+[chr(0) for ascii in range(127,256)]) assert len(mapping)==256 return _fastq_generic(in_handle,out_handle,mapping) |
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mapping = "".join([chr(0) for ascii in range(0, [[#variable5d01bce0]])]+[chr( [[#variable77c04300]]+int(round( [[#variable5c08eb40]](q)))) for q in range( [[#variable5d01bc00]],62+1)]+[chr(0) for ascii in range(127,256)]) assert len(mapping)==256 return _fastq_generic(in_handle,out_handle,mapping) |
CloneAbstraction |
Parameter Index | Clone Instance | Parameter Name | Value |
---|---|---|---|
1 | 1 | [[#5d01bce0]] | 64 |
1 | 2 | [[#5d01bce0]] | 59 |
1 | 3 | [[#5d01bce0]] | 59 |
2 | 1 | [[#77c04300]] | 64 |
2 | 2 | [[#77c04300]] | 64 |
2 | 3 | [[#77c04300]] | 33 |
3 | 1 | [[#5c08eb40]] | solexa_quality_from_phred |
3 | 2 | [[#5c08eb40]] | phred_quality_from_solexa |
3 | 3 | [[#5c08eb40]] | phred_quality_from_solexa |
4 | 1 | [[#5d01bc00]] | 0 |
4 | 2 | [[#5d01bc00]] | -5 |
4 | 3 | [[#5d01bc00]] | -5 |