Previous CloneSet | Next CloneSet | Back to Main Report |
Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
---|---|---|---|---|
10 | 3 | 6 | 0.983 | elif_clause |
Clone Abstraction | Parameter Bindings |
Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
---|---|---|---|
1 | 10 | 77 | Bio/Emboss/Primer3.py |
2 | 10 | 87 | Bio/Emboss/Primer3.py |
3 | 10 | 97 | Bio/Emboss/Primer3.py |
| ||||
elif line[5:19]=="FORWARD PRIMER": words = line.split( ) if not primer or primer.size==0: primer = Primers( ) record.primers.append(primer) primer.forward_start = int(words[2]) primer.forward_length = int(words[3]) primer.forward_tm = float(words[4]) primer.forward_gc = float(words[5]) primer.forward_seq = words[6] |
| ||||
elif line[5:19]=="REVERSE PRIMER": words = line.split( ) if not primer or primer.size==0: primer = Primers( ) record.primers.append(primer) primer.reverse_start = int(words[2]) primer.reverse_length = int(words[3]) primer.reverse_tm = float(words[4]) primer.reverse_gc = float(words[5]) primer.reverse_seq = words[6] |
| ||||
elif line[5:19]=="INTERNAL OLIGO": words = line.split( ) if not primer or primer.size==0: primer = Primers( ) record.primers.append(primer) primer.internal_start = int(words[2]) primer.internal_length = int(words[3]) primer.internal_tm = float(words[4]) primer.internal_gc = float(words[5]) primer.internal_seq = words[6] |
| |||
elif line[5:19]== [[#variable77c04220]]: words = line.split( ) if not primer or primer.size==0: primer = Primers( ) record.primers.append(primer) primer. [[#variable77c04180]]= int(words[2]) primer. [[#variable77c04120]]= int(words[3]) primer. [[#variable77c040a0]]= float(words[4]) primer. [[#variable77c04040]]= float(words[5]) primer. [[#variable19d8ffa0]]= words[6] |
CloneAbstraction |
Parameter Index | Clone Instance | Parameter Name | Value |
---|---|---|---|
1 | 1 | [[#77c04220]] | "INTERNAL OLIGO" |
1 | 2 | [[#77c04220]] | "REVERSE PRIMER" |
1 | 3 | [[#77c04220]] | "FORWARD PRIMER" |
2 | 1 | [[#77c04180]] | internal_start |
2 | 2 | [[#77c04180]] | reverse_start |
2 | 3 | [[#77c04180]] | forward_start |
3 | 1 | [[#77c04120]] | internal_length |
3 | 2 | [[#77c04120]] | reverse_length |
3 | 3 | [[#77c04120]] | forward_length |
4 | 1 | [[#77c040a0]] | internal_tm |
4 | 2 | [[#77c040a0]] | reverse_tm |
4 | 3 | [[#77c040a0]] | forward_tm |
5 | 1 | [[#77c04040]] | internal_gc |
5 | 2 | [[#77c04040]] | reverse_gc |
5 | 3 | [[#77c04040]] | forward_gc |
6 | 1 | [[#19d8ffa0]] | internal_seq |
6 | 2 | [[#19d8ffa0]] | reverse_seq |
6 | 3 | [[#19d8ffa0]] | forward_seq |