CloneSet182


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
5	3	6	0.963	or_test

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	5	31	Bio/Align/Applications/_Probcons.py
2	5	36	Bio/Align/Applications/_Probcons.py
3	5	41	Bio/Align/Applications/_Probcons.py

Clone Instance
1

Line Count
5

Source Line
31

Source File

Bio/Align/Applications/_Probcons.py

            _Option(["-c","c","--consistency","consistency"],["input"],
                    lambda x:x in range(0,6),0,"Use 0 <= REPS <= 5 (default: 2) passes of consistency transformation",0)

Clone Instance
2

Line Count
5

Source Line
36

Source File

Bio/Align/Applications/_Probcons.py

            _Option(["-ir","--iterative-refinement","iterative-refinement","ir"],["input"],
                    lambda x:x in range(0,1001),0,"Use 0 <= REPS <= 1000 (default: 100) passes of iterative-refinement",0)

Clone Instance
3

Line Count
5

Source Line
41

Source File

Bio/Align/Applications/_Probcons.py

            _Option(["-pre","--pre-training","pre-training","pre"],["input"],
                    lambda x:x in range(0,21),0,"Use 0 <= REPS <= 20 (default: 0) rounds of pretraining",0)

Clone Abstraction

Parameter Count: 6

Parameter Bindings

_Option([ [[#variable600d5ea0]], [[#variable600d5de0]], [[#variable600d5d40]], [[#variable600d5c80]]],["input"], lambda x:x in range(0, [[#variable60821f60]]),0, [[#variable600d5d20]],0)

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#600d5ea0]]`	"-pre"
1	2	`[[#600d5ea0]]`	"-ir"
1	3	`[[#600d5ea0]]`	"-c"
2	1	`[[#600d5de0]]`	"--pre-training"
2	2	`[[#600d5de0]]`	"--iterative-refinement"
2	3	`[[#600d5de0]]`	"c"
3	1	`[[#600d5d40]]`	"pre-training"
3	2	`[[#600d5d40]]`	"iterative-refinement"
3	3	`[[#600d5d40]]`	"--consistency"
4	1	`[[#600d5c80]]`	"pre"
4	2	`[[#600d5c80]]`	"ir"
4	3	`[[#600d5c80]]`	"consistency"
5	1	`[[#60821f60]]`	21
5	2	`[[#60821f60]]`	1001
5	3	`[[#60821f60]]`	6
6	1	`[[#600d5d20]]`	"Use 0 <= REPS <= 20 (default: 0) rounds of pretraining"
6	2	`[[#600d5d20]]`	"Use 0 <= REPS <= 1000 (default: 100) passes of iterative-refinement"
6	3	`[[#600d5d20]]`	"Use 0 <= REPS <= 5 (default: 2) passes of consistency transformation"