CloneSet5


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
39260.997test_pair_plus
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
139695
Bio/SubsMat/MatrixInfo.py
239767
Bio/SubsMat/MatrixInfo.py
Clone Instance
1
Line Count
39
Source Line
695
Source File
Bio/SubsMat/MatrixInfo.py

("W","F"):1,("L","R"):   -2,("S","P"):   -1,("V","T"):0,("Q","Q"):5,("N","A"):   -1,("Z","Y"):   -2,("W","R"):   -3,("Q","A"):   -1,("S","D"):0,("H","H"):7,("S","H"):   -1,("H","D"):   -1,("L","N"):   -3,("W","A"):   -3,("Y","M"):   -1,("G","R"):   -2,("Y","I"):   -1,("Y","E"):   -2,("B","Y"):   -2,("Y","A"):   -2,("V","D"):   -3,("B","S"):0,("Y","Y"):6,("G","N"):0,("E","C"):   -3,("Y","Q"):   -1,("Z","Z"):3,("V","A"):0,("C","C"):9,("M","R"):   -1,("V","E"):   -2,("T","N"):0,("P","P"):7,("V","I"):3,("V","S"):   -2,("Z","P"):   -1,("V","M"):1,("T","F"):   -2,("V","Q"):   -2,("K","K"):4,("P","D"):   -1,("I","H"):   -3,("I","D"):   -3,("T","R"):   -1,("P","L"):   -3,("K","G"):   -1,("M","N"):   -2,("P","H"):   -2,("F","Q"):   -3,("Z","G"):   -2,("X","L"):   -1,("T","M"):   -1,("Z","C"):   -3,("X","H"):   -1,("D","R"):   -1,("B","W"):   -4,("X","D"):   -1,("Z","K"):1,("F","A"):   -2,("Z","W"):   -2,("F","E"):   -3,("D","N"):1,("B","K"):0,("X","X"):   -1,("F","I"):0,("B","G"):   -1,("X","T"):0,("F","M"):0,("B","C"):   -3,("Z","I"):   -3,("Z","V"):   -2,("S","S"):4,("L","Q"):   -2,("W","E"):   -3,("Q","R"):1,("N","N"):6,("W","M"):   -1,("Q","C"):   -3,("W","I"):   -2,("S","C"):   -1,("L","A"):   -1,("S","G"):0,("L","E"):   -3,("W","Q"):   -2,("H","G"):   -2,("S","K"):0,("Q","N"):0,("N","R"):0,("H","C"):   -3,("Y","N"):   -2,("G","Q"):   -2,("Y","F"):3,("C","A"):0,("V","L"):1,("G","E"):   -2,("G","A"):0,("K","R"):2,("E","D"):2,("Y","R"):   -2,("M","Q"):0,("T","I"):   -1,("C","D"):   -3,("V","F"):   -1,("T","A"):0,("T","P"):   -1,("B","P"):   -2,("T","E"):   -1,("V","N"):   -3,("P","G"):   -2,("M","A"):   -1,("K","H"):   -1,("V","R"):   -2,("P","C"):   -3,("M","E"):   -2,("K","L"):   -2,("V","V"):4,("M","I"):1,("T","Q"):   -1,("I","G"):   -3,("P","K"):   -1,("M","M"):5,("K","D"):   -1,("I","C"):   -1,("Z","D"):1,("F","R"):   -3,("X","K"):   -1,("Q","D"):0,("X","G"):   -1,("Z","L"):   -2,("X","C"):   -2,("Z","H"):0,("B","L"):   -3,("B","H"):0,("F","F"):6,("X","W"):   -2,("B","D"):4,("D","A"):   -2,("S","L"):   -2,("X","S"):0,("F","N"):   -3,("S","R"):   -1,("W","D"):   -4,("V","Y"):   -1,("W","L"):   -2,("H","R"):0,("W","H"):   -2,("H","N"):1,("W","T"):   -2,("T","T"):4,("S","F"):   -2,("W","P"):   -4,("L","D"):   -3,("B","I"):   -3,("L","H"):   -3,("S","N"):1


Clone Instance
2
Line Count
39
Source Line
767
Source File
Bio/SubsMat/MatrixInfo.py

("W","F"):1,("L","R"):   -2,("S","P"):   -1,("V","T"):0,("Q","Q"):5,("N","A"):   -2,("Z","Y"):   -2,("W","R"):   -3,("Q","A"):   -1,("S","D"):0,("H","H"):8,("S","H"):   -1,("H","D"):   -1,("L","N"):   -3,("W","A"):   -3,("Y","M"):   -1,("G","R"):   -2,("Y","I"):   -1,("Y","E"):   -2,("B","Y"):   -3,("Y","A"):   -2,("V","D"):   -3,("B","S"):0,("Y","Y"):7,("G","N"):0,("E","C"):   -4,("Y","Q"):   -1,("Z","Z"):4,("V","A"):0,("C","C"):9,("M","R"):   -1,("V","E"):   -2,("T","N"):0,("P","P"):7,("V","I"):3,("V","S"):   -2,("Z","P"):   -1,("V","M"):1,("T","F"):   -2,("V","Q"):   -2,("K","K"):5,("P","D"):   -1,("I","H"):   -3,("I","D"):   -3,("T","R"):   -1,("P","L"):   -3,("K","G"):   -2,("M","N"):   -2,("P","H"):   -2,("F","Q"):   -3,("Z","G"):   -2,("X","L"):   -1,("T","M"):   -1,("Z","C"):   -3,("X","H"):   -1,("D","R"):   -2,("B","W"):   -4,("X","D"):   -1,("Z","K"):1,("F","A"):   -2,("Z","W"):   -3,("F","E"):   -3,("D","N"):1,("B","K"):0,("X","X"):   -1,("F","I"):0,("B","G"):   -1,("X","T"):0,("F","M"):0,("B","C"):   -3,("Z","I"):   -3,("Z","V"):   -2,("S","S"):4,("L","Q"):   -2,("W","E"):   -3,("Q","R"):1,("N","N"):6,("W","M"):   -1,("Q","C"):   -3,("W","I"):   -3,("S","C"):   -1,("L","A"):   -1,("S","G"):0,("L","E"):   -3,("W","Q"):   -2,("H","G"):   -2,("S","K"):0,("Q","N"):0,("N","R"):0,("H","C"):   -3,("Y","N"):   -2,("G","Q"):   -2,("Y","F"):3,("C","A"):0,("V","L"):1,("G","E"):   -2,("G","A"):0,("K","R"):2,("E","D"):2,("Y","R"):   -2,("M","Q"):0,("T","I"):   -1,("C","D"):   -3,("V","F"):   -1,("T","A"):0,("T","P"):   -1,("B","P"):   -2,("T","E"):   -1,("V","N"):   -3,("P","G"):   -2,("M","A"):   -1,("K","H"):   -1,("V","R"):   -3,("P","C"):   -3,("M","E"):   -2,("K","L"):   -2,("V","V"):4,("M","I"):1,("T","Q"):   -1,("I","G"):   -4,("P","K"):   -1,("M","M"):5,("K","D"):   -1,("I","C"):   -1,("Z","D"):1,("F","R"):   -3,("X","K"):   -1,("Q","D"):0,("X","G"):   -1,("Z","L"):   -3,("X","C"):   -2,("Z","H"):0,("B","L"):   -4,("B","H"):0,("F","F"):6,("X","W"):   -2,("B","D"):4,("D","A"):   -2,("S","L"):   -2,("X","S"):0,("F","N"):   -3,("S","R"):   -1,("W","D"):   -4,("V","Y"):   -1,("W","L"):   -2,("H","R"):0,("W","H"):   -2,("H","N"):1,("W","T"):   -2,("T","T"):5,("S","F"):   -2,("W","P"):   -4,("L","D"):   -4,("B","I"):   -3,("L","H"):   -3,("S","N"):1


Clone AbstractionParameter Count: 6Parameter Bindings

("W","F"):1,("L","R"): -2,("S","P"): -1,("V","T"):0,("Q","Q"):5,("N","A"): - [[#variable5ec76e00]],("Z","Y"): -2,("W","R"): -3,("Q","A"): -1,("S","D"):0,("H","H"): [[#variable5ec76da0]],("S","H"): -1,("H","D"): -1,("L","N"): -3,("W","A"): -3,("Y","M"): -1,("G","R"): -2,("Y","I"): -1,("Y","E"): -2,("B","Y"): - [[#variable5ec76ce0]],("Y","A"): -2,("V","D"): -3,("B","S"):0,("Y","Y"): [[#variable5ec76c80]],("G","N"):0,("E","C"): - [[#variable5ec76c20]],("Y","Q"): -1,("Z","Z"): [[#variable5ec76c20]],("V","A"):0,("C","C"):9,("M","R"): -1,("V","E"): -2,("T","N"):0,("P","P"):7,("V","I"):3,("V","S"): -2,("Z","P"): -1,("V","M"):1,("T","F"): -2,("V","Q"): -2,("K","K"): [[#variable5ec76bc0]],("P","D"): -1,("I","H"): -3,("I","D"): -3,("T","R"): -1,("P","L"): -3,("K","G"): - [[#variable5ec76e00]],("M","N"): -2,("P","H"): -2,("F","Q"): -3,("Z","G"): -2,("X","L"): -1,("T","M"): -1,("Z","C"): -3,("X","H"): -1,("D","R"): - [[#variable5ec76e00]],("B","W"): -4,("X","D"): -1,("Z","K"):1,("F","A"): -2,("Z","W"): - [[#variable5ec76ce0]],("F","E"): -3,("D","N"):1,("B","K"):0,("X","X"): -1,("F","I"):0,("B","G"): -1,("X","T"):0,("F","M"):0,("B","C"): -3,("Z","I"): -3,("Z","V"): -2,("S","S"):4,("L","Q"): -2,("W","E"): -3,("Q","R"):1,("N","N"):6,("W","M"): -1,("Q","C"): -3,("W","I"): - [[#variable5ec76ce0]],("S","C"): -1,("L","A"): -1,("S","G"):0,("L","E"): -3,("W","Q"): -2,("H","G"): -2,("S","K"):0,("Q","N"):0,("N","R"):0,("H","C"): -3,("Y","N"): -2,("G","Q"): -2,("Y","F"):3,("C","A"):0,("V","L"):1,("G","E"): -2,("G","A"):0,("K","R"):2,("E","D"):2,("Y","R"): -2,("M","Q"):0,("T","I"): -1,("C","D"): -3,("V","F"): -1,("T","A"):0,("T","P"): -1,("B","P"): -2,("T","E"): -1,("V","N"): -3,("P","G"): -2,("M","A"): -1,("K","H"): -1,("V","R"): - [[#variable5ec76ce0]],("P","C"): -3,("M","E"): -2,("K","L"): -2,("V","V"):4,("M","I"):1,("T","Q"): -1,("I","G"): - [[#variable5ec76c20]],("P","K"): -1,("M","M"):5,("K","D"): -1,("I","C"): -1,("Z","D"):1,("F","R"): -3,("X","K"): -1,("Q","D"):0,("X","G"): -1,("Z","L"): - [[#variable5ec76ce0]],("X","C"): -2,("Z","H"):0,("B","L"): - [[#variable5ec76c20]],("B","H"):0,("F","F"):6,("X","W"): -2,("B","D"):4,("D","A"): -2,("S","L"): -2,("X","S"):0,("F","N"): -3,("S","R"): -1,("W","D"): -4,("V","Y"): -1,("W","L"): -2,("H","R"):0,("W","H"): -2,("H","N"):1,("W","T"): -2,("T","T"): [[#variable5ec76bc0]],("S","F"): -2,("W","P"): -4,("L","D"): - [[#variable5ec76c20]],("B","I"): -3,("L","H"): -3,("S","N"):1
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#5ec76e00]]
1 
12[[#5ec76e00]]
2 
21[[#5ec76da0]]
7 
22[[#5ec76da0]]
8 
31[[#5ec76ce0]]
2 
32[[#5ec76ce0]]
3 
41[[#5ec76c80]]
6 
42[[#5ec76c80]]
7 
51[[#5ec76c20]]
3 
52[[#5ec76c20]]
4 
61[[#5ec76bc0]]
4 
62[[#5ec76bc0]]
5