CloneSet312


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
3	2	1	0.994	compound_stmt

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	3	184	Bio/AlignIO/FastaIO.py
2	3	191	Bio/AlignIO/FastaIO.py

Clone Instance
1

Line Count
3

Source Line
184

Source File

Bio/AlignIO/FastaIO.py

        while not (line[0:2]=="; " or   line[0]==">" or   ">>>" in line): 
             match_seq_parts.append(line.strip( )) 
             line = handle.readline( )

Clone Instance
2

Line Count
3

Source Line
191

Source File

Bio/AlignIO/FastaIO.py

            while not (line[0:2]=="; " or   line[0]==">" or   ">>>" in line): 
                 align_consensus_parts.append(line.strip( )) 
                 line = handle.readline( ) 
             #If we do anything with this in future, must remove any flanking region.

Clone Abstraction

Parameter Count: 1

Parameter Bindings

while not (line[0:2]=="; " or line[0]==">" or ">>>" in line):
   [[#variable5d6deac0]].append(line.strip( )) 
  line = handle.readline( ) 
  #If we do anything with this in future, must remove any flanking region.

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#5d6deac0]]`	align_consensus_parts
1	2	`[[#5d6deac0]]`	match_seq_parts