CloneSet238


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
27	2	6	0.971	file_input_element_list[2]

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	27	26	Bio/ExPASy/__init__.py
2	24	54	Bio/ExPASy/__init__.py

Clone Instance
1

Line Count
27

Source Line
26

Source File

Bio/ExPASy/__init__.py

def get_prodoc_entry(id,cgi = "http://www.expasy.ch/cgi-bin/get-prodoc-entry"):
                                                                              
    """get_prodoc_entry(id,
    cgi='http://www.expasy.ch/cgi-bin/get-prodoc-entry') -> handle

    Get a handle to a PRODOC entry at ExPASy in HTML format. 

    For a non-existing key XXX, ExPASy returns an HTML-formatted page
    containing this line:
    'There is no PROSITE documentation entry XXX. Please try again.'
    """ 
    # Open a handle to ExPASy.
    handle = urllib.urlopen("%s?%s"%(cgi,id)) 
    return handle 

def get_prosite_entry(id,cgi = "http://www.expasy.ch/cgi-bin/get-prosite-entry"):
                                                                            
    """get_prosite_entry(id,
    cgi='http://www.expasy.ch/cgi-bin/get-prosite-entry') -> handle

    Get a handle to a PROSITE entry at ExPASy in HTML format.

    For a non-existing key XXX, ExPASy returns an HTML-formatted page
    containing this line:
    'There is currently no PROSITE entry for XXX. Please try again.'
    """ 
    handle = urllib.urlopen("%s?%s"%(cgi,id)) 
    return handle

Clone Instance
2

Line Count
24

Source Line
54

Source File

Bio/ExPASy/__init__.py

def get_prosite_raw(id,cgi = "http://www.expasy.ch/cgi-bin/get-prosite-raw.pl"):
                                                                               
    """get_prosite_raw(id,
                       cgi='http://www.expasy.ch/cgi-bin/get-prosite-raw.pl')
    -> handle

    Get a handle to a raw PROSITE or PRODOC entry at ExPASy.

    For a non-existing key, ExPASy returns nothing.
    """ 
    handle = urllib.urlopen("%s?%s"%(cgi,id)) 
    return handle 

def get_sprot_raw(id,cgi = "http://www.expasy.ch/cgi-bin/get-sprot-raw.pl"):
                                                                           
    """get_sprot_raw(id, cgi='http://www.expasy.ch/cgi-bin/get-sprot-raw.pl')
    -> handle

    Get a handle to a raw SwissProt entry at ExPASy.

    For a non-existing key XXX, ExPASy returns an HTML-formatted page
    containing this line:
    'XXX is not a valid identifier.'
    """ 
    handle = urllib.urlopen("%s?%s"%(cgi,id)) 
    return handle

Clone Abstraction

Parameter Count: 6

Parameter Bindings

def [[#variable6af4abe0]](id,cgi = [[#variable6af4ab40]]):
   [[#variable6af4ab20]]
  # Open a handle to ExPASy.
  handle = urllib.urlopen("%s?%s"%(cgi,id)) 
  return handle 

def [[#variable753ce960]](id,cgi = [[#variable6af4a9e0]]):
   [[#variable6af4a960]]
  handle = urllib.urlopen("%s?%s"%(cgi,id)) 
  return handle

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#6af4abe0]]`	get_prodoc_entry
1	2	`[[#6af4abe0]]`	get_prosite_raw
2	1	`[[#6af4ab40]]`	"http://www.expasy.ch/cgi-bin/get-prodoc-entry"
2	2	`[[#6af4ab40]]`	"http://www.expasy.ch/cgi-bin/get-prosite-raw.pl"
3	1	`[[#6af4ab20]]`	"""get_prodoc_entry(id, cgi='http://www.expasy.ch/cgi-bin/get-prodoc-entry') -> handle Get a handle to a PRODOC entry at ExPASy in HTML format. For a non-existing key XXX, ExPASy returns an HTML-formatted page containing this line: 'There is no PROSITE documentation entry XXX. Please try again.' """
3	2	`[[#6af4ab20]]`	"""get_prosite_raw(id, cgi='http://www.expasy.ch/cgi-bin/get-prosite-raw.pl') -> handle Get a handle to a raw PROSITE or PRODOC entry at ExPASy. For a non-existing key, ExPASy returns nothing. """
4	1	`[[#753ce960]]`	get_prosite_entry
4	2	`[[#753ce960]]`	get_sprot_raw
5	1	`[[#6af4a9e0]]`	"http://www.expasy.ch/cgi-bin/get-prosite-entry"
5	2	`[[#6af4a9e0]]`	"http://www.expasy.ch/cgi-bin/get-sprot-raw.pl"
6	1	`[[#6af4a960]]`	"""get_prosite_entry(id, cgi='http://www.expasy.ch/cgi-bin/get-prosite-entry') -> handle Get a handle to a PROSITE entry at ExPASy in HTML format. For a non-existing key XXX, ExPASy returns an HTML-formatted page containing this line: 'There is currently no PROSITE entry for XXX. Please try again.' """
6	2	`[[#6af4a960]]`	"""get_sprot_raw(id, cgi='http://www.expasy.ch/cgi-bin/get-sprot-raw.pl') -> handle Get a handle to a raw SwissProt entry at ExPASy. For a non-existing key XXX, ExPASy returns an HTML-formatted page containing this line: 'XXX is not a valid identifier.' """