CloneSet111


Previous CloneSetNext CloneSetBack to Main Report
Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
5250.981elif_clause
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
15200
Bio/PDB/PDBParser.py
26219
Bio/PDB/PDBParser.py
Clone Instance
1
Line Count
5
Source Line
200
Source File
Bio/PDB/PDBParser.py

            elif (record_type=="ANISOU"):
                                        
                anisou = map(float,(line[28:35],line[35:42],line[43:49],line[49:56],line[56:63],line[63:70])) 
                # U's are scaled by 10^4 
                anisou_array = (numpy.array(anisou,"f")/10000.0) .astype("f") 
                structure_builder.set_anisou(anisou_array) 


Clone Instance
2
Line Count
6
Source Line
219
Source File
Bio/PDB/PDBParser.py

            elif (record_type=="SIGUIJ"):
                                        
                # standard deviation of anisotropic B factor
                siguij = map(float,(line[28:35],line[35:42],line[42:49],line[49:56],line[56:63],line[63:70])) 
                # U sigma's are scaled by 10^4
                siguij_array = (numpy.array(siguij,"f")/10000.0) .astype("f") 
                structure_builder.set_siguij(siguij_array) 


Clone AbstractionParameter Count: 5Parameter Bindings

elif (record_type== [[#variable5ddf8960]]):
  # standard deviation of anisotropic B factor
   [[#variable5ddf88c0]]= map(float,(line[28:35],line[35:42],line[ [[#variable5ddf8820]]:49],line[49:56],line[56:63],line[63:70])) 
   [[#variable5ddf8780]]= (numpy.array( [[#variable5ddf88c0]],"f")/10000.0).astype("f") 
  structure_builder. [[#variable5ddf8700]]( [[#variable5ddf8780]]) 
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#5ddf8960]]
"ANISOU" 
12[[#5ddf8960]]
"SIGUIJ" 
21[[#5ddf88c0]]
anisou 
22[[#5ddf88c0]]
siguij 
31[[#5ddf8820]]
43 
32[[#5ddf8820]]
42 
41[[#5ddf8780]]
# U's are scaled by 10^4 
anisou_array 
42[[#5ddf8780]]
# U sigma's are scaled by 10^4
siguij_array 
51[[#5ddf8700]]
set_anisou 
52[[#5ddf8700]]
set_siguij