CloneSet107


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
5420.973compound_stmt
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
16140
Bio/SeqUtils/lcc.py
25146
Bio/SeqUtils/lcc.py
35151
Bio/SeqUtils/lcc.py
45156
Bio/SeqUtils/lcc.py
Clone Instance
1
Line Count
6
Source Line
140
Source File
Bio/SeqUtils/lcc.py

    if "A" not in seq: 
         term_a = 0 
         # Check to avoid calculating the log of 0.
    else: 
         term_a = ((upper.count("A"))/float(wsize))*((math.log((upper.count("A"))/float(wsize)))/l2) 


Clone Instance
2
Line Count
5
Source Line
146
Source File
Bio/SeqUtils/lcc.py

    if "C" not in seq: 
         term_c = 0 
    else: 
         term_c = ((upper.count("C"))/float(wsize))*((math.log((upper.count("C"))/float(wsize)))/l2) 


Clone Instance
3
Line Count
5
Source Line
151
Source File
Bio/SeqUtils/lcc.py

    if "T" not in seq: 
         term_t = 0 
    else: 
         term_t = ((upper.count("T"))/float(wsize))*((math.log((upper.count("T"))/float(wsize)))/l2) 


Clone Instance
4
Line Count
5
Source Line
156
Source File
Bio/SeqUtils/lcc.py

    if "G" not in seq: 
         term_g = 0 
    else: 
         term_g = ((upper.count("G"))/float(wsize))*((math.log((upper.count("G"))/float(wsize)))/l2) 


Clone AbstractionParameter Count: 2Parameter Bindings

if [[#variable19aec380]]not in seq:
   [[#variable19aec320]]= 0 
  # Check to avoid calculating the log of 0.
else:
   [[#variable19aec320]]= ((upper.count( [[#variable19aec380]]))/float(wsize))*((math.log((upper.count( [[#variable19aec380]]))/float(wsize)))/l2) 
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#19aec380]]
"G" 
12[[#19aec380]]
"T" 
13[[#19aec380]]
"C" 
14[[#19aec380]]
"A" 
21[[#19aec320]]
term_g 
22[[#19aec320]]
term_t 
23[[#19aec320]]
term_c 
24[[#19aec320]]
term_a