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Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
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21 | 2 | 3 | 0.986 | stmt_list[4] |
Clone Abstraction | Parameter Bindings |
Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
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1 | 21 | 1445 | Bio/Blast/NCBIStandalone.py |
2 | 21 | 1501 | Bio/Blast/NCBIStandalone.py |
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def end_alignment(self): _AlignmentConsumer.end_alignment(self) if self._alignment.hsps: self.data.alignments.append(self._alignment) if self._multiple_alignment.alignment: self.data.multiple_alignment = self._multiple_alignment def end_hsp(self): _HSPConsumer.end_hsp(self) try : self._alignment.hsps.append(self._hsp) except AttributeError: raise ValueError("Found an HSP before an alignment") def end_database_report(self): _DatabaseReportConsumer.end_database_report(self) self.data.__dict__.update(self._dr.__dict__) def end_parameters(self): _ParametersConsumer.end_parameters(self) self.data.__dict__.update(self._params.__dict__) |
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def end_alignment(self): _AlignmentConsumer.end_alignment(self) if self._alignment.hsps: self._round.alignments.append(self._alignment) if self._multiple_alignment: self._round.multiple_alignment = self._multiple_alignment def end_hsp(self): _HSPConsumer.end_hsp(self) try : self._alignment.hsps.append(self._hsp) except AttributeError: raise ValueError("Found an HSP before an alignment") def end_database_report(self): _DatabaseReportConsumer.end_database_report(self) self.data.__dict__.update(self._dr.__dict__) def end_parameters(self): _ParametersConsumer.end_parameters(self) self.data.__dict__.update(self._params.__dict__) |
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def end_alignment(self): _AlignmentConsumer.end_alignment(self) if self._alignment.hsps: self. [[#variable195f09e0]].alignments.append(self._alignment) if [[#variable5d77e6e0]]. [[#variable77a2ac60]]: self. [[#variable195f09e0]].multiple_alignment = self._multiple_alignment def end_hsp(self): _HSPConsumer.end_hsp(self) try : self._alignment.hsps.append(self._hsp) except AttributeError: raise ValueError("Found an HSP before an alignment") def end_database_report(self): _DatabaseReportConsumer.end_database_report(self) self.data.__dict__.update(self._dr.__dict__) def end_parameters(self): _ParametersConsumer.end_parameters(self) self.data.__dict__.update(self._params.__dict__) |
CloneAbstraction |
Parameter Index | Clone Instance | Parameter Name | Value |
---|---|---|---|
1 | 1 | [[#195f09e0]] | data |
1 | 2 | [[#195f09e0]] | _round |
2 | 1 | [[#5d77e6e0]] | self._multiple_alignment |
2 | 2 | [[#5d77e6e0]] | self |
3 | 1 | [[#77a2ac60]] | alignment |
3 | 2 | [[#77a2ac60]] | _multiple_alignment |