CloneSet82


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
8	3	3	0.990	compound_stmt

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	8	86	Bio/Encodings/IUPACEncoding.py
2	8	109	Bio/Encodings/IUPACEncoding.py
3	8	119	Bio/Encodings/IUPACEncoding.py

Clone Instance
1

Line Count
8

Source Line
86

Source File

Bio/Encodings/IUPACEncoding.py

for id,obj in  Translate.unambiguous_rna_by_id.items( ):
                                                       
    property = "translator.id.%d"%id 
    set_prop[obj.table.nucleotide_alphabet.__class__][property] = obj 
    property = "rna_translator.id.%d"%id 
    set_prop[obj.table.protein_alphabet.__class__][property] = obj 
    if id==1:  
        set_prop[obj.table.nucleotide_alphabet.__class__]["translator"] = obj 
        set_prop[obj.table.protein_alphabet.__class__]["rna_translator"] = obj 

# ambiguous translator objects

Clone Instance
2

Line Count
8

Source Line
109

Source File

Bio/Encodings/IUPACEncoding.py

for id,obj in  Translate.ambiguous_dna_by_id.items( ):
                                                     
    property = "translator.id.%d"%id 
    set_prop[obj.table.nucleotide_alphabet.__class__][property] = obj 
    property = "ambiguous_translator.id.%d"%id 
    set_prop[obj.table.protein_alphabet.__class__][property] = obj 
    if id==1:  
        set_prop[obj.table.nucleotide_alphabet.__class__]["translator"] = obj 
        set_prop[obj.table.protein_alphabet.__class__]["ambiguous_translator"] = obj

Clone Instance
3

Line Count
8

Source Line
119

Source File

Bio/Encodings/IUPACEncoding.py

for id,obj in  Translate.ambiguous_rna_by_id.items( ):
                                                     
    property = "translator.id.%d"%id 
    set_prop[obj.table.nucleotide_alphabet.__class__][property] = obj 
    property = "ambiguous_rna_translator.id.%d"%id 
    set_prop[obj.table.protein_alphabet.__class__][property] = obj 
    if id==1:  
        set_prop[obj.table.nucleotide_alphabet.__class__]["translator"] = obj 
        set_prop[obj.table.protein_alphabet.__class__]["ambiguous_rna_translator"] = obj

Clone Abstraction

Parameter Count: 3

Parameter Bindings

for id,obj in Translate. [[#variable2d93a440]].items( ):
  property = "translator.id.%d"%id 
  set_prop[obj.table.nucleotide_alphabet.__class__][property] = obj 
  property = [[#variable5c542dc0]]%id 
  set_prop[obj.table.protein_alphabet.__class__][property] = obj 
  if id==1:
  
    set_prop[obj.table.nucleotide_alphabet.__class__]["translator"] = obj 
    set_prop[obj.table.protein_alphabet.__class__][ [[#variable5c542ca0]]] = obj 
    # ambiguous translator objects

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#2d93a440]]`	ambiguous_rna_by_id
1	2	`[[#2d93a440]]`	ambiguous_dna_by_id
1	3	`[[#2d93a440]]`	unambiguous_rna_by_id
2	1	`[[#5c542dc0]]`	"ambiguous_rna_translator.id.%d"
2	2	`[[#5c542dc0]]`	"ambiguous_translator.id.%d"
2	3	`[[#5c542dc0]]`	"rna_translator.id.%d"
3	1	`[[#5c542ca0]]`	"ambiguous_rna_translator"
3	2	`[[#5c542ca0]]`	"ambiguous_translator"
3	3	`[[#5c542ca0]]`	"rna_translator"