CloneSet77


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
8	4	4	0.970	stmt_list[8]

Clone Abstraction

Parameter Bindings

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	8	175	Scripts/SeqGui/SeqGui.py
2	8	186	Scripts/SeqGui/SeqGui.py
3	8	197	Scripts/SeqGui/SeqGui.py
4	8	208	Scripts/SeqGui/SeqGui.py

Clone Instance
1

Line Count
8

Source Line
175

Source File

Scripts/SeqGui/SeqGui.py

        text = self.src_text.GetValue( ) 
        seq = text[ : ] 
        seq = string.join(string.split(seq)) 
        dna = Seq.Seq(seq,IUPAC.unambiguous_dna) 
        print dna 
        protein = trans.translate_to_stop(dna) 
        self.dest_text.Clear( ) 
        self.dest_text.SetValue(protein.tostring( ))

Clone Instance
2

Line Count
8

Source Line
186

Source File

Scripts/SeqGui/SeqGui.py

        text = self.src_text.GetValue( ) 
        seq = text[ : ] 
        seq = string.join(string.split(seq)) 
        protein = Seq.Seq(seq,IUPAC.unambiguous_dna) 
        print protein 
        dna = trans.back_translate(protein) 
        self.dest_text.Clear( ) 
        self.dest_text.SetValue(dna.tostring( ))

Clone Instance
3

Line Count
8

Source Line
197

Source File

Scripts/SeqGui/SeqGui.py

        text = self.src_text.GetValue( ) 
        seq = text[ : ] 
        seq = string.join(string.split(seq)) 
        dna = Seq.Seq(seq,IUPAC.unambiguous_dna) 
        print dna 
        rna = trans.transcribe(dna) 
        self.dest_text.Clear( ) 
        self.dest_text.SetValue(rna.tostring( ))

Clone Instance
4

Line Count
8

Source Line
208

Source File

Scripts/SeqGui/SeqGui.py

        text = self.src_text.GetValue( ) 
        seq = text[ : ] 
        seq = string.join(string.split(seq)) 
        rna = Seq.Seq(seq,IUPAC.unambiguous_rna) 
        print rna 
        dna = trans.back_transcribe(rna) 
        self.dest_text.Clear( ) 
        self.dest_text.SetValue(dna.tostring( ))

Clone Abstraction

Parameter Count: 4

Parameter Bindings

text = self.src_text.GetValue( ) 
seq = text[ : ] 
seq = string.join(string.split(seq)) 
 [[#variable7628b080]]= Seq.Seq(seq,IUPAC. [[#variable78a2ce20]]) 
print [[#variable7628b080]]
 [[#variable71abe0c0]]= trans. [[#variable71abe0a0]]( [[#variable7628b080]]) 
self.dest_text.Clear( ) 
self.dest_text.SetValue( [[#variable71abe0c0]].tostring( ))

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#7628b080]]`	rna
1	2	`[[#7628b080]]`	dna
1	3	`[[#7628b080]]`	protein
1	4	`[[#7628b080]]`	dna
2	1	`[[#78a2ce20]]`	unambiguous_rna
2	2	`[[#78a2ce20]]`	unambiguous_dna
2	3	`[[#78a2ce20]]`	unambiguous_dna
2	4	`[[#78a2ce20]]`	unambiguous_dna
3	1	`[[#71abe0c0]]`	dna
3	2	`[[#71abe0c0]]`	rna
3	3	`[[#71abe0c0]]`	dna
3	4	`[[#71abe0c0]]`	protein
4	1	`[[#71abe0a0]]`	back_transcribe
4	2	`[[#71abe0a0]]`	transcribe
4	3	`[[#71abe0a0]]`	back_translate
4	4	`[[#71abe0a0]]`	translate_to_stop