CloneSet77


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
8440.970stmt_list[8]
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
18175
Scripts/SeqGui/SeqGui.py
28186
Scripts/SeqGui/SeqGui.py
38197
Scripts/SeqGui/SeqGui.py
48208
Scripts/SeqGui/SeqGui.py
Clone Instance
1
Line Count
8
Source Line
175
Source File
Scripts/SeqGui/SeqGui.py

        text = self.src_text.GetValue( ) 
        seq = text[ : ] 
        seq = string.join(string.split(seq)) 
        dna = Seq.Seq(seq,IUPAC.unambiguous_dna) 
        print dna 
        protein = trans.translate_to_stop(dna) 
        self.dest_text.Clear( ) 
        self.dest_text.SetValue(protein.tostring( )) 


Clone Instance
2
Line Count
8
Source Line
186
Source File
Scripts/SeqGui/SeqGui.py

        text = self.src_text.GetValue( ) 
        seq = text[ : ] 
        seq = string.join(string.split(seq)) 
        protein = Seq.Seq(seq,IUPAC.unambiguous_dna) 
        print protein 
        dna = trans.back_translate(protein) 
        self.dest_text.Clear( ) 
        self.dest_text.SetValue(dna.tostring( )) 


Clone Instance
3
Line Count
8
Source Line
197
Source File
Scripts/SeqGui/SeqGui.py

        text = self.src_text.GetValue( ) 
        seq = text[ : ] 
        seq = string.join(string.split(seq)) 
        dna = Seq.Seq(seq,IUPAC.unambiguous_dna) 
        print dna 
        rna = trans.transcribe(dna) 
        self.dest_text.Clear( ) 
        self.dest_text.SetValue(rna.tostring( )) 


Clone Instance
4
Line Count
8
Source Line
208
Source File
Scripts/SeqGui/SeqGui.py

        text = self.src_text.GetValue( ) 
        seq = text[ : ] 
        seq = string.join(string.split(seq)) 
        rna = Seq.Seq(seq,IUPAC.unambiguous_rna) 
        print rna 
        dna = trans.back_transcribe(rna) 
        self.dest_text.Clear( ) 
        self.dest_text.SetValue(dna.tostring( )) 


Clone AbstractionParameter Count: 4Parameter Bindings

text = self.src_text.GetValue( ) 
seq = text[ : ] 
seq = string.join(string.split(seq)) 
 [[#variable7628b080]]= Seq.Seq(seq,IUPAC. [[#variable78a2ce20]]) 
print [[#variable7628b080]]
 [[#variable71abe0c0]]= trans. [[#variable71abe0a0]]( [[#variable7628b080]]) 
self.dest_text.Clear( ) 
self.dest_text.SetValue( [[#variable71abe0c0]].tostring( )) 
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#7628b080]]
rna 
12[[#7628b080]]
dna 
13[[#7628b080]]
protein 
14[[#7628b080]]
dna 
21[[#78a2ce20]]
unambiguous_rna 
22[[#78a2ce20]]
unambiguous_dna 
23[[#78a2ce20]]
unambiguous_dna 
24[[#78a2ce20]]
unambiguous_dna 
31[[#71abe0c0]]
dna 
32[[#71abe0c0]]
rna 
33[[#71abe0c0]]
dna 
34[[#71abe0c0]]
protein 
41[[#71abe0a0]]
back_transcribe 
42[[#71abe0a0]]
transcribe 
43[[#71abe0a0]]
back_translate 
44[[#71abe0a0]]
translate_to_stop