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Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
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4 | 2 | 3 | 0.975 | stmt_list[4] |
Clone Abstraction | Parameter Bindings |
Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
---|---|---|---|
1 | 4 | 178 | Bio/SeqIO/FastaIO.py |
2 | 4 | 189 | Bio/SeqIO/FastaIO.py |
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print "--------" print "FastaIterator (single sequence)" iterator = FastaIterator(open(fna_filename,"r"),alphabet = generic_nucleotide,title2ids = genbank_name_function) count = 0 |
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print "--------" print "FastaIterator (multiple sequences)" iterator = FastaIterator(open(faa_filename,"r"),alphabet = generic_protein,title2ids = genbank_name_function) count = 0 |
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print "--------" print [[#variable78a215a0]] iterator = FastaIterator(open( [[#variable5e2c7820]],"r"),alphabet = [[#variable5e2c7800]],title2ids = genbank_name_function) count = 0 |
CloneAbstraction |
Parameter Index | Clone Instance | Parameter Name | Value |
---|---|---|---|
1 | 1 | [[#78a215a0]] | "FastaIterator (single sequence)" |
1 | 2 | [[#78a215a0]] | "FastaIterator (multiple sequences)" |
2 | 1 | [[#5e2c7820]] | fna_filename |
2 | 2 | [[#5e2c7820]] | faa_filename |
3 | 1 | [[#5e2c7800]] | generic_nucleotide |
3 | 2 | [[#5e2c7800]] | generic_protein |