CloneSet398

Bio/MarkovModel.py

Bio/MarkovModel.py

    if p_transition==None: 
         p_transition = _random_norm((N,N)) 
    else: 
         p_transition = _copy_and_check(p_transition,(N,N)) 

    if p_emission==None: 
         p_emission = _random_norm((N,M)) 
    else: 
         p_emission = _copy_and_check(p_emission,(N,M)) 

     # Do all the calculations in log space to avoid underflows.

if [[#variable780e3000]]==None:
   [[#variable780e3000]]= _random_norm((N, [[#variable780e39e0]])) 
else:
   [[#variable780e3000]]= _copy_and_check( [[#variable780e3000]],(N, [[#variable780e39e0]])) 
  # Do all the calculations in log space to avoid underflows.
 

p_transition 

p_emission 

N 

M