CloneSet356

Bio/KDTree/KDTree.py

Bio/KDTree/KDTree.py

    neighbors = kdt.neighbor_search(radius) 
    r = [neighbor.radius for neighbor in neighbors] 
    if r is None: 
         l1 = 0 
    else: 
         l1 = len(r) 
     # now do a slow search to compare results

    neighbors = kdt.neighbor_simple_search(radius) 
    r = [neighbor.radius for neighbor in neighbors] 
    if r is None: 
         l2 = 0 
    else: 
         l2 = len(r) 

neighbors = kdt. [[#variable754115a0]](radius) 
r = [neighbor.radius for neighbor in neighbors] 
if r is None:
   [[#variable76ca1ea0]]= 0 
else:
   [[#variable76ca1ea0]]= len(r) 
  # now do a slow search to compare results
 

neighbor_simple_search 

neighbor_search 

l2 

l1