| Previous CloneSet | Next CloneSet | Back to Main Report |
| Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
|---|---|---|---|---|
| 3 | 2 | 5 | 0.955 | tests |
| Clone Abstraction | Parameter Bindings |
| Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
|---|---|---|---|
| 1 | 3 | 530 | Bio/SeqIO/QualityIO.py |
| 2 | 3 | 709 | Bio/SeqIO/QualityIO.py |
| ||||
dict((qs,chr(min(126,int(round(phred_quality_from_solexa(qs)))+SANGER_SCORE_OFFSET)))
for qs in range( -5,93+1))
|
| ||||
dict((qp,chr(min(126,int(round(solexa_quality_from_phred(qp)))+SOLEXA_SCORE_OFFSET)))
for qp in range(0,62+1))
|
| |||
dict(( [[#variable76ca54e0]],chr(min(126,int(round( [[#variable76ca5400]]( [[#variable76ca54e0]])))+ [[#variable76ca53e0]]))) for [[#variable76ca54e0]]in range( [[#variable76ca4700]], [[#variable76ca5440]]+1)) |
| CloneAbstraction |
| Parameter Index | Clone Instance | Parameter Name | Value |
|---|---|---|---|
| 1 | 1 | [[#76ca54e0]] | qs |
| 1 | 2 | [[#76ca54e0]] | qp |
| 2 | 1 | [[#76ca5400]] | phred_quality_from_solexa |
| 2 | 2 | [[#76ca5400]] | solexa_quality_from_phred |
| 3 | 1 | [[#76ca53e0]] | SANGER_SCORE_OFFSET |
| 3 | 2 | [[#76ca53e0]] | SOLEXA_SCORE_OFFSET |
| 4 | 1 | [[#76ca4700]] | -5 |
| 4 | 2 | [[#76ca4700]] | 0 |
| 5 | 1 | [[#76ca5440]] | 93 |
| 5 | 2 | [[#76ca5440]] | 62 |