CloneSet29


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
27260.990stmt_list[5]
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
1251067
Bio/Graphics/GenomeDiagram/_CircularDrawer.py
2271105
Bio/Graphics/GenomeDiagram/_CircularDrawer.py
Clone Instance
1
Line Count
25
Source Line
1067
Source File
Bio/Graphics/GenomeDiagram/_CircularDrawer.py

            p.addArc(self.xcenter,self.ycenter,shaft_outer_radius,90-(headangle*180/pi),90-(startangle*180/pi),reverse = True) 


            p.lineTo(x0+outer_radius*headsin,y0+outer_radius*headcos) 
            if abs(angle)<0.5:   
                p.lineTo(x0+middle_radius*endsin,y0+middle_radius*endcos) 
                p.lineTo(x0+inner_radius*headsin,y0+inner_radius*headcos) 
            else: 
                dx = min(0.1,abs(angle)/50.0)  #auto-scale number of steps
                x = dx 
                while x<1:   
                    r = outer_radius-x*(outer_radius-middle_radius) 
                    a = headangle+x*(endangle-headangle) 
                    p.lineTo(x0+r*sin(a),y0+r*cos(a)) 
                    x+=dx 
                p.lineTo(x0+middle_radius*endsin,y0+middle_radius*endcos) 
                x = dx 
                while x<1:   
                    r = middle_radius-x*(middle_radius-inner_radius) 
                    a = headangle+(1-x)*(endangle-headangle) 
                    p.lineTo(x0+r*sin(a),y0+r*cos(a)) 
                    x+=dx 
                p.lineTo(x0+inner_radius*headsin,y0+inner_radius*headcos) 
            p.closePath( ) 
            return p 


Clone Instance
2
Line Count
27
Source Line
1105
Source File
Bio/Graphics/GenomeDiagram/_CircularDrawer.py

            p.addArc(self.xcenter,self.ycenter,shaft_outer_radius,90-(endangle*180/pi),90-(headangle*180/pi),reverse = False) 


            p.lineTo(x0+outer_radius*headsin,y0+outer_radius*headcos) 
            #TODO - two staight lines is only a good approximation for small
            #head angle, in general will need to curved lines here:
            if abs(angle)<0.5:   
                p.lineTo(x0+middle_radius*startsin,y0+middle_radius*startcos) 
                p.lineTo(x0+inner_radius*headsin,y0+inner_radius*headcos) 
            else: 
                dx = min(0.1,abs(angle)/50.0)  #auto-scale number of steps
                x = dx 
                while x<1:   
                    r = outer_radius-x*(outer_radius-middle_radius) 
                    a = headangle+x*(startangle-headangle) 
                    p.lineTo(x0+r*sin(a),y0+r*cos(a)) 
                    x+=dx 
                p.lineTo(x0+middle_radius*startsin,y0+middle_radius*startcos) 
                x = dx 
                while x<1:   
                    r = middle_radius-x*(middle_radius-inner_radius) 
                    a = headangle+(1-x)*(startangle-headangle) 
                    p.lineTo(x0+r*sin(a),y0+r*cos(a)) 
                    x+=dx 
                p.lineTo(x0+inner_radius*headsin,y0+inner_radius*headcos) 
            p.closePath( ) 
            return p 


Clone AbstractionParameter Count: 6Parameter Bindings

p.addArc(self.xcenter,self.ycenter,shaft_outer_radius,90-( [[#variable73024b20]]*180/pi),90-( [[#variable7800a3a0]]*180/pi),reverse = [[#variable7306f9e0]]) 
p.lineTo(x0+outer_radius*headsin,y0+outer_radius*headcos) 
#TODO - two staight lines is only a good approximation for small
#head angle, in general will need to curved lines here:
if abs(angle)<0.5:
  p.lineTo(x0+middle_radius* [[#variable16811640]],y0+middle_radius* [[#variable60189da0]]) 
  p.lineTo(x0+inner_radius*headsin,y0+inner_radius*headcos) 
else:
  dx = min(0.1,abs(angle)/50.0) #auto-scale number of steps
  x = dx 
  while x<1:
  
    r = outer_radius-x*(outer_radius-middle_radius) 
    a = headangle+x*( [[#variable7306fac0]]-headangle) 
    p.lineTo(x0+r*sin(a),y0+r*cos(a)) 
    x+=dx 
  p.lineTo(x0+middle_radius* [[#variable16811640]],y0+middle_radius* [[#variable60189da0]]) 
  x = dx 
  while x<1:
  
    r = middle_radius-x*(middle_radius-inner_radius) 
    a = headangle+(1-x)*( [[#variable7306fac0]]-headangle) 
    p.lineTo(x0+r*sin(a),y0+r*cos(a)) 
    x+=dx 
  p.lineTo(x0+inner_radius*headsin,y0+inner_radius*headcos) 
p.closePath( ) 
return p 
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#73024b20]]
endangle 
12[[#73024b20]]
headangle 
21[[#7800a3a0]]
headangle 
22[[#7800a3a0]]
startangle 
31[[#7306f9e0]]
False 
32[[#7306f9e0]]
True 
41[[#16811640]]
startsin 
42[[#16811640]]
endsin 
51[[#60189da0]]
startcos 
52[[#60189da0]]
endcos 
61[[#7306fac0]]
startangle 
62[[#7306fac0]]
endangle