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Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
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8 | 2 | 2 | 0.991 | compound_stmt |
Clone Abstraction | Parameter Bindings |
Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
---|---|---|---|
1 | 8 | 142 | Bio/AlignIO/ClustalIO.py |
2 | 8 | 218 | Bio/AlignIO/ClustalIO.py |
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if len(fields)==3: #This MAY be an old style file with a letter count... try : letters = int(fields[2]) except ValueError: raise ValueError("""Could not parse line, bad sequence number: %s""" %line) if len(fields[1].replace("-",""))!=letters: raise ValueError("""Could not parse line, invalid sequence number: %s""" %line) |
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if len(fields)==3: #This MAY be an old style file with a letter count... try : letters = int(fields[2]) except ValueError: raise ValueError("""Could not parse line, bad sequence number: %s""" %line) if len(seqs[i].replace("-",""))!=letters: raise ValueError("""Could not parse line, invalid sequence number: %s""" %line) #Read in the next line |
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if len(fields)==3: #This MAY be an old style file with a letter count... try : letters = int(fields[2]) except ValueError: raise ValueError("""Could not parse line, bad sequence number: %s""" %line) if len( [[#variable18fbbfa0]][ [[#variable18fbbf20]]].replace("-",""))!=letters: raise ValueError("""Could not parse line, invalid sequence number: %s""" %line) #Read in the next line |
CloneAbstraction |
Parameter Index | Clone Instance | Parameter Name | Value |
---|---|---|---|
1 | 1 | [[#18fbbfa0]] | fields |
1 | 2 | [[#18fbbfa0]] | seqs |
2 | 1 | [[#18fbbf20]] | 1 |
2 | 2 | [[#18fbbf20]] | i |