CloneSet135


Clone Mass	Clones in CloneSet	Parameter Count	Clone Similarity	Syntax Category [Sequence Length]
4	5	2	0.959	stmt_list[4]

Clone Abstraction

Parameter Bindings


Bio/SeqIO/_index.py
Bio/SeqIO/_index.py
Bio/SeqIO/_index.py
Bio/SeqIO/_index.py
Bio/SeqIO/_index.py

Clone Instance (Click to see clone)	Line Count	Source Line	Source File
1	4	191	Bio/SeqIO/_index.py
2	4	243	Bio/SeqIO/_index.py
3	4	281	Bio/SeqIO/_index.py
4	4	315	Bio/SeqIO/_index.py
5	4	334	Bio/SeqIO/_index.py

Clone Instance
1

Line Count
4

Source Line
191

Source File

Bio/SeqIO/_index.py

        _IndexedSeqFileDict.__init__(self,filename,alphabet,key_function) 
        self._format = format 
        handle = self._handle 
        marker_re = re.compile("^%s"%marker)

Clone Instance
2

Line Count
4

Source Line
243

Source File

Bio/SeqIO/_index.py

        _IndexedSeqFileDict.__init__(self,filename,alphabet,key_function) 
        self._format = "genbank" 
        handle = self._handle 
        marker_re = re.compile("^LOCUS ")

Clone Instance
3

Line Count
4

Source Line
281

Source File

Bio/SeqIO/_index.py

        _IndexedSeqFileDict.__init__(self,filename,alphabet,key_function) 
        self._format = "embl" 
        handle = self._handle 
        marker_re = re.compile("^ID ")

Clone Instance
4

Line Count
4

Source Line
315

Source File

Bio/SeqIO/_index.py

        _IndexedSeqFileDict.__init__(self,filename,alphabet,key_function) 
        self._format = "swiss" 
        handle = self._handle 
        marker_re = re.compile("^ID ")

Clone Instance
5

Line Count
4

Source Line
334

Source File

Bio/SeqIO/_index.py

        _IndexedSeqFileDict.__init__(self,filename,alphabet,key_function) 
        self._format = "ig" 
        handle = self._handle 
        marker_re = re.compile("^;")

Clone Abstraction

Parameter Count: 2

Parameter Bindings

_IndexedSeqFileDict.__init__(self,filename,alphabet,key_function) 
self._format = [[#variable71b451e0]]
handle = self._handle 
marker_re = re.compile( [[#variable76c6a640]])

CloneAbstraction

Parameter Bindings
Parameter Index	Clone Instance	Parameter Name	Value
1	1	`[[#71b451e0]]`	format
1	2	`[[#71b451e0]]`	"genbank"
1	3	`[[#71b451e0]]`	"embl"
1	4	`[[#71b451e0]]`	"swiss"
1	5	`[[#71b451e0]]`	"ig"
2	1	`[[#76c6a640]]`	"^%s"%marker
2	2	`[[#76c6a640]]`	"^LOCUS "
2	3	`[[#76c6a640]]`	"^ID "
2	4	`[[#76c6a640]]`	"^ID "
2	5	`[[#76c6a640]]`	"^;"